Issues

• downloaded weights not compatible with new version

  3dem/model-angelo#128 · Filter by author ads7788-maker opened on Oct 2, 2026

• prot.fasta

  3dem/model-angelo#123 · Filter by author Hai-W-L opened on Mar 13, 2026

• Error in model building of protein fibril

  3dem/model-angelo#120 · Filter by author Bhargy001 opened on Dec 8, 2025

• IndexError: arrays used as indices must be of integer (or boolean) type

  3dem/model-angelo#114 · Filter by author mmucsf opened on Nov 19, 2024

• ModelAngelo in RELION generates corrupted or incomplete files

  3dem/model-angelo#112 · Filter by author baratachencho opened on Oct 10, 2024
  1

• possible debug

  3dem/model-angelo#111 · Filter by author ChenShengsGitHub opened on Sep 11, 2024

• some ideas

  3dem/model-angelo#109 · Filter by author DmitrySemchonok opened on Jun 18, 2024
  1

• shape '[5, 20]' is invalid for input of size 20

  3dem/model-angelo#107 · Filter by author akashrajaram1 opened on May 23, 2024
  1

• ModelAngelo fails when using fasta files

  3dem/model-angelo#106 · Filter by author ezbie opened on May 9, 2024
  1

• About the training data

  3dem/model-angelo#105 · Filter by author Qmi3 opened on Apr 17, 2024
  1

• UserWarning: Applied workaround for CuDNN issue, install nvrtc.so

  3dem/model-angelo#104 · Filter by author arr0i3 opened on Apr 16, 2024
  2

• Default config.json Issue

  3dem/model-angelo#103 · Filter by author MXXXZ opened on Mar 20, 2024
  1

• ModelAngelo on Mac M1 or M2 (no Nvidia GPU)?

  3dem/model-angelo#101 · Filter by author jelegheert opened on Mar 1, 2024

• running -c with custom config.json. Only want to change threshold but more arguments need defining

  3dem/model-angelo#100 · Filter by author fergusonscripps opened on Feb 28, 2024
  4

• Include undetermined amino acids and handle gaps

  3dem/model-angelo#99 · Filter by author hnguyentt opened on Feb 13, 2024

• Make fasta file from best_hits file

  3dem/model-angelo#98 · Filter by author jamaliki opened on Feb 9, 2024
  

• Chain and residue numbering issues

  3dem/model-angelo#97 · Filter by author ccgauvin94 opened on Feb 2, 2024
  13

• shell closes when running install script

  3dem/model-angelo#96 · Filter by author gregdp opened on Jan 30, 2024
  3

• config.json file

  3dem/model-angelo#95 · Filter by author chenwei-zhang opened on Jan 24, 2024
  3

  

• CUDA out of memory

  3dem/model-angelo#94 · Filter by author reorocha opened on Dec 14, 2023

• cuda not recognized

  3dem/model-angelo#78 · Filter by author davidhoover opened on Oct 10, 2023
  4

• Can not handle map with nxstart/nystart/nzstart!=0

  3dem/model-angelo#77 · Filter by author wang3702 opened on Oct 7, 2023
  3

• Build ends in error when using ModelAngelo 1.0.1

  3dem/model-angelo#66 · Filter by author Appoota opened on Aug 28, 2023
  4

• Refinement or Post-Process Maps

  3dem/model-angelo#54 · Filter by author mjaremko opened on Jun 15, 2023
  1

• Modelangelo v1.0.1 failing if the fasta contains unknown residues "X"

  3dem/model-angelo#53 · Filter by author sroet opened on Jun 15, 2023
  4