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Starred repositories

10 stars written in Java
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A browser automation framework and ecosystem.

Java 34,518 8,717 Updated Oct 2, 2026

The Pharmacogenomic Clinical Annotation Tool

Java 193 62 Updated Sep 25, 2026

Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool

Java 184 99 Updated Mar 11, 2026

TensorDash is an application that lets you remotely monitor your deep learning model's metrics and notifies you when your model training is completed or crashed.

Java 173 24 Updated Jan 9, 2023

HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.

Java 79 22 Updated Feb 28, 2023

DEPICT code, instructions and an example

Java 57 23 Updated Dec 10, 2025

Cross matching drugs from different databases ( Drugbank, STITCH, ChEMBL PubChem, UMLS, TTD, KEGG, ZINC ) and saving in a structured TSV file.

Java 37 8 Updated Jan 22, 2024
Java 29 12 Updated Feb 23, 2026

A Java-based software for visualizing and translating the KEGG PATHWAY database. Conversion of KGML files into BioPAX, SBML, GraphML, GML, and various other formats.

Java 21 11 Updated Jun 26, 2023

Java implementation of SEA

Java 2 Updated Dec 27, 2019