Issues

• Report representative genomes with ANI ≥95% but outside the GTDB species circumscription radius

  Ecogenomics/GTDBTk#717 · Filter by author fplazaonate opened on Aug 5, 2026
  1

  

• GTDB-Tk v2.7.2 + r232: skani hash mismatch on check_install

  error
  Ecogenomics/GTDBTk#708 · Filter by author SMU-sunwendong opened on May 8, 2026
  2

• Compress download tarball with xz

  Ecogenomics/GTDBTk#703 · Filter by author zwets opened on Apr 28, 2026
  2

• Use type strains for GTDB to NCBI taxonomy translation

  Ecogenomics/GTDBTk#552 · Filter by author fplazaonate opened on Oct 16, 2023
  2

• Use Pyrodigal as Prodigal alternative

  enhancement
  Ecogenomics/GTDBTk#456 · Filter by author lfenske-93 opened on Dec 5, 2022
  2

• Write debug file on exception

  enhancement
  Ecogenomics/GTDBTk#432 · Filter by author aaronmussig opened on Sep 11, 2022

• Establish novelty of user genomes

  enhancement
  Ecogenomics/GTDBTk#233 · Filter by author donovan-h-parks opened on Mar 13, 2020

• Non-parametric bootstraps

  enhancement
  Ecogenomics/GTDBTk#116 · Filter by author donovan-h-parks opened on Apr 17, 2019