Issues

• The versions of Scanpy, AnnData, or H5py that STCAT depends on contain a bug, which makes them unable to read .h5ad files generated with more recent versions of Scanpy.

  GuoBioinfoLab/STCAT#8 · Filter by author Constantine-mty opened on Sep 24, 2025

• 该包的并行在windows上不适用

  GuoBioinfoLab/STCAT#7 · Filter by author qibi777 opened on Sep 12, 2025
  4

• Can it be used on mouse data?

  GuoBioinfoLab/STCAT#6 · Filter by author Lucyyang1991 opened on Aug 30, 2025
  1

• adata = sc.AnnData.concatenate(adata_None_T, adata_T_UN_D, adata_T_sub_CD4, adata_T_sub_CD8, index_unique = None, batch_key= None)

  GuoBioinfoLab/STCAT#4 · Filter by author wangyiheng-666 opened on Mar 26, 2025

• PBMC3K test

  GuoBioinfoLab/STCAT#3 · Filter by author Liripo opened on Mar 26, 2025

• Errors with sklearn and matrix generation

  GuoBioinfoLab/STCAT#2 · Filter by author jasoncrucify opened on Mar 9, 2025
  2