Issues

kourami implemeneted in EHR-linked biobanks?
Kingsford-Group/kourami#41 · opened on Jan 7, 2026
Safer - Compatible Updates to Fix Vulnerable Dependencies
Kingsford-Group/kourami#40 · opened on Jul 16, 2025
HLA-E typing
Kingsford-Group/kourami#38 · opened on Feb 23, 2025
2
Is this code still being maintained?
Kingsford-Group/kourami#37 · opened on Aug 3, 2023
NullPointerException in MergeMSFs.java
Kingsford-Group/kourami#36 · opened on Jul 23, 2023
java.lang.IndexOutOfBoundsException
Kingsford-Group/kourami#35 · opened on Nov 30, 2022
UPDATING error probabilities of each edge
Kingsford-Group/kourami#34 · opened on Aug 17, 2022
Combined bottleneck weights cutoff
Kingsford-Group/kourami#33 · opened on Apr 25, 2022
Duplicate reads in BAM
Kingsford-Group/kourami#30 · opened on Sep 2, 2020
2
Can I use Kourami on other species?
Kingsford-Group/kourami#29 · opened on Aug 11, 2020
DRB5_gen wrong with IMGT/HLA Release 3.40.0 and HLA Release 3.41.0
Kingsford-Group/kourami#28 · opened on Jul 15, 2020
1
Cannot extract any read from IGSR High Coverage sample
Kingsford-Group/kourami#27 · opened on Apr 8, 2020
Running Kourami with non human MHC
Kingsford-Group/kourami#26 · opened on Nov 5, 2019
3
Null Pointer on Kourami call
Kingsford-Group/kourami#25 · opened on Oct 9, 2019
3
java.lang.NullPointerException during Bubble Processing
Kingsford-Group/kourami#23 · opened on Nov 29, 2018
9
typing additional loci
Kingsford-Group/kourami#20 · opened on Nov 19, 2018
19
formatIMGT.sh NullPointerException
Kingsford-Group/kourami#19 · opened on Oct 15, 2018
10