Issues

• Next Release Timeline and Bug Fixes

  MathOnco/valis#250 · Filter by author Moradzadeh1999 opened on Jun 28, 2026
  1

• Registered OME-TIFF file size abnormally larger than original image

  MathOnco/valis#247 · Filter by author pimooook opened on Apr 29, 2026
  2

• Thresholds to rotation and scaling

  MathOnco/valis#246 · Filter by author simomounir opened on Apr 20, 2026
  3

• UnboundLocalError in register_micro()

  MathOnco/valis#243 · Filter by author smith6jt-cop opened on Mar 16, 2026
  1

• What caused this error?

  MathOnco/valis#240 · Filter by author gxygogogo opened on Feb 27, 2026

• Coordinate warping of microscope movement

  MathOnco/valis#236 · Filter by author simomounir opened on Feb 13, 2026

• Registration of H&E of continuous sections

  MathOnco/valis#234 · Filter by author Microbiods opened on Jan 12, 2026
  1

• Apply transformation matrix to images with double the resolution, but cannot overlap

  MathOnco/valis#233 · Filter by author rockie-ding opened on Jan 9, 2026
  3

• Non-Rigid Resolution and Pipeline Order

  MathOnco/valis#231 · Filter by author Mizuki-Kishikawa opened on Dec 18, 2025

• Location of Micro-Rigid Registration Results

  MathOnco/valis#230 · Filter by author Mizuki-Kishikawa opened on Dec 18, 2025

• Saving Transformation Parameters instead of Images

  MathOnco/valis#229 · Filter by author Mizuki-Kishikawa opened on Dec 18, 2025

• Setting the "check_for_reflections option = True" prevents registration from running

  MathOnco/valis#227 · Filter by author Mizuki-Kishikawa opened on Dec 10, 2025
  4

• Some Python code blocks are not displayed in https://valis.readthedocs.io/

  MathOnco/valis#226 · Filter by author lascqy opened on Dec 5, 2025
  1

• registration of Immunofluorescence of continuous sections

  MathOnco/valis#223 · Filter by author gxygogogo opened on Nov 20, 2025
  15

• Installation not working

  MathOnco/valis#221 · Filter by author Lux-aura opened on Nov 12, 2025
  2

• VALIS generate mask for the control tissue of the IHC, not for the wanted tissue

  MathOnco/valis#220 · Filter by author Shentl opened on Oct 30, 2025
  5

• Valis picking up thumbs.db file

  MathOnco/valis#219 · Filter by author ewestlundicr opened on Oct 22, 2025
  1

• Error in cleaning after rigid registration: 'Valis' object has no attribute 'non_rigid_reg_kwargs'

  MathOnco/valis#218 · Filter by author maxime915 opened on Oct 18, 2025
  1

• cpu need

  MathOnco/valis#213 · Filter by author lingxitong opened on Sep 23, 2025
  1

• Micro Rigid Registrar Tutorial

  MathOnco/valis#210 · Filter by author ewestlundicr opened on Sep 11, 2025
  3

• Permission error when writing bf_formats.txt file

  MathOnco/valis#209 · Filter by author fercer opened on Aug 28, 2025
  5

• updated last version : serWarning: can't convert cuda:0 device type tensor to numpy. Use Tensor.cpu() to copy the tensor to host memory first.

  MathOnco/valis#208 · Filter by author anthomontan opened on Aug 19, 2025
  8

• Output channels all the same in CziJpgxrReader._read_mosaic() ?

  MathOnco/valis#207 · Filter by author zindy opened on Aug 18, 2025
  1

• How to get Tissue mask?

  MathOnco/valis#206 · Filter by author alejandro-lozano-dev opened on Aug 14, 2025
  2

• wrong register ans

  MathOnco/valis#203 · Filter by author lingxitong opened on Jun 23, 2025