The definitive list that answers "I want to do X in Python, which tool should I use?"

Animation engine for explanatory math videos

A community-maintained Python framework for creating mathematical animations.

Data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe, Keras), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials,…

The interactive graphing library for Python ✨

Code samples for my book "Neural Networks and Deep Learning"

Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.

TuShare is a utility for crawling historical data of China stocks

ASCII generator (image to text, image to image, video to video)

汉字转拼音(pypinyin)

《大语言模型》作者：赵鑫，李军毅，周昆，唐天一，文继荣

Run MapReduce jobs on Hadoop or Amazon Web Services

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

Efficient pythonic random access to fasta subsequences

Methylation/modified base calling separated from basecalling.

Clairvoyante: a multi-task convolutional deep neural network for variant calling in Single Molecule Sequencing

A lightweight and handy variant calling pipeline generator for whole-genome sequencing (WGS) and whole exom sequencing data (WES) analysis by using GATK and Sentieon. 一个基于 GATK 和 Sentieon 的简易且全面的 W…

Genomics data visualization in Python by using matplotlib.

A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.

Command line tools for CMDB varaints browser

A phasing and imputation pipeline for NGS data

GDBIGtools: A command line tools for GDBIG varaints browser

A NGS data analysis toolkit

【Force on Genotyping】A new and practical human (or diploid) genome variants caller for de novo assembly or long reads alignment