Issues

• Nanopolish index "num reads with path to fast5" is less than "num reads"

  jts/nanopolish#1161 · Filter by author Jaco0417 opened on Oct 31, 2025
  3

• filter reads before nanopolish?

  jts/nanopolish#1160 · Filter by author XiaoKaixuan12333 opened on Oct 3, 2025

• Is it possible to infer the read_id

  jts/nanopolish#1159 · Filter by author mumdark opened on Jun 18, 2025
  2

• READ_FAILED_LOAD in polya_results.tsv

  jts/nanopolish#1158 · Filter by author bioramen-Blip opened on May 28, 2025
  2

• Data cannot be obtained.

  jts/nanopolish#1157 · Filter by author HJiaYao opened on May 14, 2025
  3

• eventalign problem: Failed to read uncompressed data at offset 4850678: Stale file handle

  jts/nanopolish#1156 · Filter by author wdesaintjean opened on Mar 25, 2025

• to run the 'nanopolish polya ' get err

  jts/nanopolish#1155 · Filter by author wangguiqian opened on Feb 26, 2025

• M1 compilation issue

  jts/nanopolish#1154 · Filter by author xianantwist opened on Jan 15, 2025

• POD5 nanopolish index

  jts/nanopolish#1153 · Filter by author Tang-pro opened on Jan 8, 2025
  4

• nanopolish call-methylation showing Segmentation fault (core dumped)

  jts/nanopolish#1152 · Filter by author shakti83kumar opened on Nov 27, 2024
  4

• some issues about nanopolish polyA module

  jts/nanopolish#1151 · Filter by author lopp1Y opened on Oct 14, 2024

• Obtaining TSV output with R10.4

  jts/nanopolish#1146 · Filter by author psorigue opened on Sep 12, 2024
  1

• Nanopolish calling methyaltion

  jts/nanopolish#1145 · Filter by author xyy-xiao opened on Sep 5, 2024
  6

• Clarification on R10.4 and polya

  jts/nanopolish#1144 · Filter by author bnpapas opened on Sep 4, 2024
  3

• poly A will not open Bam file

  jts/nanopolish#1143 · Filter by author jayradke opened on Aug 7, 2024
  1

• cannot find shared library (libhdf5.so.10)

  jts/nanopolish#1142 · Filter by author claudiacarter opened on Jul 22, 2024

• Segmentation fault in nanopolish eventalign

  jts/nanopolish#1141 · Filter by author lyj95618 opened on May 8, 2024
  1

• After basecallling with dorado, nanopolish was unable to recognize methylation information

  jts/nanopolish#1140 · Filter by author happier21 opened on Apr 7, 2024
  7

• A nanopolish version v0.14.1?

  jts/nanopolish#1127 · Filter by author hasindu2008 opened on Feb 19, 2024

• A few questions about using nanopolish to estimate poly(A) tail length

  jts/nanopolish#1125 · Filter by author lopp1Y opened on Jan 15, 2024
  1

• Make quits halfway without the nanopolish executable

  jts/nanopolish#1124 · Filter by author ZachChua opened on Jan 12, 2024
  3

• Install fails because of HDF5 file

  jts/nanopolish#1121 · Filter by author jayradke opened on Jan 6, 2024
  9

• Where can I find bisulfite data?

  jts/nanopolish#1119 · Filter by author fengyilin118 opened on Dec 15, 2023
  1

• nanopolish polya outputting NO FILE LOADED

  jts/nanopolish#1118 · Filter by author glf20 opened on Dec 7, 2023
  6

• Nanopolish Variants Using Low Proportion Of Reads

  jts/nanopolish#1117 · Filter by author seanmsjkim opened on Nov 15, 2023