Issues

• make with COMP=false fails: HRA component overrides in uberon.Makefile depend on undefined stamp rule (breaks #gogoeditdiff)

  obophenotype/uberon#3780 · Filter by author cellsemantic opened on Sep 28, 2026

• Implement CLARA on Uberon GA

  obophenotype/uberon#3778 · Filter by author dosumis opened on Sep 21, 2026
  

• [Fix] UBERON:0003351 'pharyngeal epithelium' is chordate-restricted but generically labelled

  obophenotype/uberon#3776 · Filter by author gabdank opened on Sep 18, 2026
  1

• [NTR] cloaca outside Vertebrata, or generalise UBERON:0000162

  new term request
  obophenotype/uberon#3775 · Filter by author gabdank opened on Sep 18, 2026
  1

• [NTR] respiratory tree (Holothuroidea)

  new term request
  obophenotype/uberon#3774 · Filter by author gabdank opened on Sep 18, 2026
  1

• 11 definitions in the 2026-06-19 release promise a part_of the axioms do not state, and 21 HPO phenotype definitions rest on those terms, and 20 automatic definitions place a metapodial element inside a digit the axioms declare disjoint from it

  obophenotype/uberon#3773 · Filter by author H0-LawJik opened on Sep 18, 2026

• Missing has_part relations to CL: systematic scan of term definitions (33 evidence-backed candidates)

  obophenotype/uberon#3769 · Filter by author mellybelly opened on Sep 14, 2026

• "thigh" may not be an appropriate exact synonym of hindlimb stylopod

  obophenotype/uberon#3768 · Filter by author jclerman opened on Sep 11, 2026
  5

• Definitions vs axioms in the 2026-06-19 release: a tooth both inside the head and disjoint from it, three terms whose definition and axiom disagree, and 12 candidate part_of axioms

  obophenotype/uberon#3767 · Filter by author H0-LawJik opened on Sep 11, 2026
  1

• State publicly where specimen / sample-type terms belong (organoid, cell culture, PBMC, biopsy)

  obophenotype/uberon#3766 · Filter by author mellybelly opened on Sep 7, 2026

• Track Uberon/CL single-cell coverage as a recurring report

  obophenotype/uberon#3765 · Filter by author mellybelly opened on Sep 7, 2026

• Create a single-cell sampling-site subset from observed usage

  obophenotype/uberon#3764 · Filter by author mellybelly opened on Sep 7, 2026

• Update the code that refreshes the PORO ontology

  composite
  obophenotype/uberon#3763 · Filter by author gouttegd opened on Aug 31, 2026
  

• Versioning mismatch

  obophenotype/uberon#3756 · Filter by author rasakereh opened on Aug 21, 2026

• mandibular organ

  new term request
  obophenotype/uberon#3755 · Filter by author saracarsanaro opened on Aug 18, 2026

• NTR: arthropod spinneret

  new term request
  obophenotype/uberon#3753 · Filter by author ANiknejad opened on Aug 17, 2026

• crustacean eyestalk

  new term request
  obophenotype/uberon#3750 · Filter by author saracarsanaro opened on Aug 6, 2026

• Question about an Arthropod Anatomy Ontology and NTR: Haller's organ

  new term request
  obophenotype/uberon#3749 · Filter by author ANiknejad opened on Aug 4, 2026
  1

• UBERON:0023867 islands of Calleja of olfactory tubercle, relationship and taxon constraint

  textual definition
  obophenotype/uberon#3747 · Filter by author ANiknejad opened on Aug 3, 2026

• Please revisit issue #2688

  obophenotype/uberon#3746 · Filter by author jrsjrs opened on Jul 28, 2026

• test2

  obophenotype/uberon#3743 · Filter by author cmungall opened on Jul 28, 2026
  2

• hemichordata hepatic region

  new term request
  obophenotype/uberon#3740 · Filter by author ANiknejad opened on Jul 27, 2026

• NTR: pancreas of Aselli

  new term request
  obophenotype/uberon#3736 · Filter by author ANiknejad opened on Jul 13, 2026

• Completing HRA branches

  new term request
  obophenotype/uberon#3735 · Filter by author dosumis opened on Jul 6, 2026

• Update periodontium

  obophenotype/uberon#3734 · Filter by author allenbaron opened on Jun 23, 2026