Commits

History for

Commits on Nov 8, 2018

qaGbTracks now reports stderr when a command fails, and call to bedIntersect fixed, refs #21010
christopherLee1
committed
b4a83c3

Commits on Nov 2, 2018

Woops forgot one spot to allow zero length items, refs #22364
christopherLee1
committed
2c9bfff

Commits on Nov 1, 2018

Making some minor changes to qa scripts, refs #20980 #22364
christopherLee1
committed
00b6bc6

Commits on Aug 27, 2018

dregs of non-kent/src/ files for change cse to soe
galt
committed
5381c23

Commits on Oct 19, 2017

Only check overlap with the gap table if we are not checking the gap table. Only check unbridged gaps if explicitly asked
christopherLee1
committed
4917a38

Commits on Sep 18, 2017

Big search & replace: use https instead of http for NCBI URLs. refs #17793
AngieHinrichs
committed
a0c8e5e

Commits on Jul 5, 2017

Improving output from constructOutputUrls function to be aware of parents, both composites and superTracks. Also changed checkGapOverlap function to call makeBedFromTable for gap tables. Putting fu…
matthewspeir
committed
a97ba30

Commits on Jun 29, 2017

Renaming tableTypeUtils to trackUtils as it more accurate. Also more track-centered functions will be added to it soon. Changing references to tableTypeUtils to trackUtils. Inspired by CR, refs #19495
matthewspeir
committed
c6266a2

Commits on May 31, 2017

Correcting minor typo in checkSplit function. Adding hideTracks=1 to output URL to hide all tracks but those you're looking at. Adding short comments to the beginning of each function. All part of …
matthewspeir
committed
df4198a

Commits on May 24, 2017

Adding two new library files: checkGapOverlap and tableTypeUtils. checkGapOverlap contains functions needed to create a bed3 file out of a given table, check overlap of items in this bed3 with gaps…
matthewspeir
committed
d540dfe

Commits on Feb 15, 2017

Adding new big* types to factory.py. Changed how pslQa.py creates itemSizes and chromSizes files. Uses built-in tempfile functions to create so they are automatically cleaned up on program close. n…
matthewspeir
committed
cddaecf

Commits on Jan 10, 2017

Commits on Dec 8, 2016

Commits on Oct 9, 2013

small updates to ra library in gbData
mmaddren
committed
5cde70e

Commits on Jun 27, 2013

Added pgSnp track types to chromTypes list.
Brooke Rhead
committed
547edf6

Commits on Dec 18, 2012

updated libraries and some tools to make some things clearer, as per code review v276 final
mmaddren
committed
8480791

Commits on Nov 27, 2012

fixed spelling error
mmaddren
committed
efbae53

Commits on Nov 15, 2012

added support for new cv terms (cell and antibody) as well as some bugfixes for library
mmaddren
committed
5123a0c

Commits on Sep 28, 2012

Added vcfTabix to pointer track types.
Brooke Rhead
committed
5be4686
Changed formatting of count/megabase numbers in countPerChrom to shorten output. Also sent featureBits commands and output to reporter (requested by QAers). Redmine 9075#note-13 and 7224#note-17.
Brooke Rhead
committed
57a45bb

Commits on Sep 24, 2012

Changed qaGbTracks so that it prints statistics about chromosome item counts to log file rather than the count of every chrom to a separate chrom file. See redmine #9075.
Brooke Rhead
committed
bbd56c4

Commits on Aug 10, 2012

added a warning for new and revoked files at the same time
Matt Wong
committed
1320ec0

Commits on Aug 1, 2012

Forgot to commit makefile for cvValidate.
vsmalladi
committed
26cb56c

Commits on Jun 7, 2012

changed it so the top header will show all supplemental instead of just enw ones, same behavior as the rest of the categories
Matt Wong
committed
c815b68

Commits on Jun 6, 2012

making output better to read
Matt Wong
committed
34087e3

Commits on Jun 5, 2012

Fixed typo.
Brooke Rhead
committed
da9c6d8

Commits on Jun 1, 2012

Fixed comments on validation methods.
Brooke Rhead
committed
b57121a

Commits on May 31, 2012

Commits on May 29, 2012

chnged timeout to 60 seconds
Matt Wong
committed
642c985

Commits on May 23, 2012

changing the way current trackDb is determined more robust, and doesn't fail when there's no alpha
Matt Wong
committed
e44f569