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1. GexMolGen GexMolGen Public

   Cross-modal generation of molecules from gene expression inputs. (Briefings in Bioinformatics 2024)

   Python 11 1

2. GenoHoption GenoHoption Public

   A framework to bridge gene network graphs and single-cell foundation models. (IEEE International Conference on Bioinformatics and Biomedicine 2024)

   Python 9

3. PRESCRIBE PRESCRIBE Public

   A framework to estimate uncertainty in single-cell response prediction. (NeurIPS 2025)

   Python 8

4. scTranslation scTranslation Public

   ScTranslation is a benchmark for single-cell cross-modality translation (RNA ↔ ATAC/ADT). (KDD 2026)

   Python 8 1