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Body-snatched by AI
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Body-snatched by AI
6 followers · 11 following

Achievements

Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: StarstruckAchievement: QuickdrawAchievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

Achievements

Achievement: Pair ExtraordinaireAchievement: YOLOAchievement: StarstruckAchievement: QuickdrawAchievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

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Dfupa/README.md

Hi there, fellow traveller! 👋

Bioinformatician by trade · Workflow enthusiast · Container advocate · AI tinkerer

Hello! I'm Diego, a Bioinformatician by trade based in Barcelona. I enjoy coding as well as trying to simplify and improve reproducibility by using workflow managers and setting up containers. I also experiment with AI-based projects, and sometimes dive into "vibe coding" projects.

🛠️ Tools & Languages

Python Bash R HTML5 Snakemake Nextflow Docker Singularity

🔬 About Me

ORCID Google Scholar LinkedIn

🧬 Pipelines & Software I've directly developed or co-developed

Redundans Genlit meTAline Karyon PhylomeDB MeTaPhORs EvolClustDB CandidaMine

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  1. Gabaldonlab/redundans Gabaldonlab/redundans Public

    Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.

    C++ 188 23

  2. Gabaldonlab/karyon Gabaldonlab/karyon Public

    This is the Karyon Pipeline

    Python 3 1

  3. Genlit Genlit Public

    GenLit automates discovery of disease-associated genes & variants through NLP-powered literature mining (PubMed/PMC), ClinVar integration, and optional Perplexity AI cross-validation for systematic…

    Python 2

  4. Gabaldonlab/meTAline Gabaldonlab/meTAline Public

    A snakemake pipeline for metagenomics analysis, it facilitates an efficient workflow to preprocess short reads metagenomics data: from read trimming and filtering, through host read subtraction to …

    Python 2