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1. NKI-AI/dlup NKI-AI/dlup Public

   Dlup are the Deep Learning Utilities for Pathology developed at the Netherlands Cancer Institute

   Python 30 6

2. schumacherlab/STAPLER schumacherlab/STAPLER Public

   STAPLER (Shared TCR And Peptide Language bidirectional Encoder Representations from transformers) is a language model that uses a joint TCRab-peptide input to predict TCRab-peptide specificity.

   Python 28 2

3. NKI-AI/ahcore NKI-AI/ahcore Public archive

   Ahcore is the AI for Oncology core computational pathology toolkit

   Python 17 1

4. NKI-AI/CERM NKI-AI/CERM Public

   Constrained Empirical Risk Minimization

   Python 5 1

5. NKI-AI/hyperparameter-search-template NKI-AI/hyperparameter-search-template Public

   A basic setup for automatic submission and tracking of large hyperparameter experiments. UvA Deep Learning 2 Course.

   Python 7

6. NKI-AI/kandinsky-calibration NKI-AI/kandinsky-calibration Public

   Kandinsky conformal prediction for image segmentation algorithms

   Python 11 3