Tags: JianYang-Lab/gsMap
Toggle v1.73.8's commit message
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fix: resolve kaleido/plotly incompatibility and scipy sparse OOM
- Pin kaleido <1.0.0 since kaleido 1.x requires plotly >=6.1.1
while the project uses plotly 5.x
- Use two-step sparse matrix indexing in spatial_ldsc to avoid
scipy's _get_arrayXarray broadcasting a 51.6 GiB dense intermediate
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Toggle v1.73.6's commit message
Merge pull request #1 from JianYang-Lab/main
fix: Docker workflow - convert repository name to lowercase
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Refactor spatial_neighbors initialization and handling of edge cases …
…in connectivity.py
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Bumps version to 1.73.5. #45
fix: Automatically handle low-quality SNPs ( #45 )
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bump version to 1.73.4
- #45 Fix the error of generate_ld_score when some SNPs are filtered out due to having bad quality in the plink file.
Toggle v1.73.3's commit message
Apply the same filter to both the LD score and SNP-gene matrix.
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Fix bug #26 in diagnosis.py to avoid overflow in data integrity check.
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