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1. ChopChopMF ChopChopMF Public

   Faster, Friendlier Protein Analysis in ChimeraX for everyone

   Python 2

2. AlphaFold-Guide AlphaFold-Guide Public

   A practical, beginner-to-expert guide to AlphaFold2, ColabFold, AlphaFold3, AlphaMissense and ChopChopMF — built while learning to predict and analyze protein structures myself.

   2

3. CryoSTAR-Base CryoSTAR-Base Public

   Web-based project management and analysis pipeline for cryo-electron tomography. Integrates AreTomo3, WarpTools, PyTom template matching, and RELION subtomogram averaging into a unified workflow.

   Python

4. reliontree reliontree Public

   Standalone RELION job-lineage viewer — no ChimeraX, no third-party server framework, no GUI toolkit required

   Python

5. ScriptOS ScriptOS Public

   The fast, safe way to run Python or R scripts — as an app, no terminal required.

   Python 1