Skip to content
View MuteJester's full-sized avatar
18 followers · 9 following

Achievements

Achievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Pair ExtraordinaireAchievement: Arctic Code Vault Contributor

Achievements

Achievement: YOLOAchievement: Pull Sharkx2Achievement: QuickdrawAchievement: Pair ExtraordinaireAchievement: Arctic Code Vault Contributor

Highlights

  • Pro

Block or report MuteJester

Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
MuteJester/README.md

PhD candidate working on algorithms, probabilistic models and machine learning for immune receptor sequences (BCR and TCR repertoires).

Main projects

Website · Google Scholar · ORCID · CV (PDF)

Pinned Loading

  1. AlignAIR AlignAIR Public

    Deep-learning V(D)J aligner for BCR and TCR sequences. A single model predicts V/D/J allele calls, segment boundaries and the junction, with AIRR-format output. Published in Nucleic Acids Research …

    Python 3 2

  2. GenAIRR GenAIRR Public

    Fast simulator of BCR and TCR sequences with full ground-truth annotations: V(D)J recombination, somatic hypermutation and sequencing artifacts across 23 species. Rust core with a Python API, for t…

    Rust 9 3

  3. LZGraphs LZGraphs Public

    Alignment-free graph models of TCR and BCR repertoires built from Lempel-Ziv and FlashBack string decompositions. Compute sequence generation probability (Pgen) and repertoire diversity, and genera…

    Python 8

  4. Fernsicht Fernsicht Public

    Watch long-running jobs from any device. Wrap any command to stream its progress, ETA and rate to a web viewer over peer-to-peer WebRTC. No signup, no code changes.

    Go 1