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1. assemblerflow/flowcraft assemblerflow/flowcraft Public

   FlowCraft: a component-based pipeline composer for omics analysis using Nextflow. 🐳📦

   Python 251 45

2. TriFusion TriFusion Public

   Streamlining phylogenomic data gathering, processing and visualization

   Python 88 23

3. innuca-nf innuca-nf Public

   A nextflow implementation of INNUENDO quality control of reads, de novo assembly and contigs quality assessment, and possible contamination search

   Python 3

4. assemblerflow/flowcraft-webapp assemblerflow/flowcraft-webapp Public

   FlowCraft companion web application

   JavaScript 4

5. SNPair_LD SNPair_LD Public

   Calculates pairwise SNP linkage disequilibirum from a VCF file

   R 2 1

6. vcf2PCA vcf2PCA Public

   Principal component analysis of SNP data with interactive plot

   R 8