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1. AIRR-pipeline AIRR-pipeline Public

   Minimal immune repertoire analysis pipeline using Change-O data to calculate clone diversity metrics (Shannon, Simpson) and visualize B-cell clonal distributions. Built in R.

   R

2. gene_annotator gene_annotator Public

   Command-line tool for retrieving and logging human gene annotations from MyGene.info

   Python

3. rna-seq-star-docker rna-seq-star-docker Public

   Docker pipeline for RNA-Seq alignment using STAR

   Dockerfile

4. mold-mutation-pipeline mold-mutation-pipeline Public

   Mutation detection pipeline from pooled FASTQ

   Python