tool for calculating genotypic diagnostic values for discrete traits or classes given variant calling and phenotypic data

various tools that help with deep sequencing analysis

Pipeline for gene candidate discovery based on mutagenesis. Featured in gene cloning research published in Nature (DOIs: 10.1038/s41467-020-14937-2, 10.1038/s41467-021-23738-0, 10.1038/s41477-021-0…

Custom scripts and workflows used in the genomics and population analysis of oat crown rust (Puccinia coronata f. sp. avenae) preprint (bioRxiv 2023.09.18.557855). All steps performed in Linux envi…

Scripts and code used in the Pm1/AvrPm1 cloning paper ( https://doi.org/10.1111/nph.17075) for analysis of chromosome 7A from bread wheat cultivar Axminster. All commands and programs run in Linux …