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@TurakhiaLab

Turakhia Lab

Popular repositories Loading

  1. ROADIES ROADIES Public

    Tool for fully-automated inference of species trees from raw genome assemblies

    Cuda 50 5

  2. panman panman Public

    Pangenome Mutation-Annotated Networks

    C++ 45 8

  3. TWILIGHT TWILIGHT Public

    High throughput tool for tall and wide multiple sequence alignment.

    C++ 31 1

  4. DIPPER DIPPER Public

    Distance-based Phylogenetic Placer

    C++ 24 2

  5. WEPP WEPP Public

    Wastewater-Based Epidemiology using Phylogenetic Placements

    C++ 19 3

  6. DP-HLS DP-HLS Public

    HLS-based framework to accelerate the implementation of 2-D DP kernels on FPGA

    C++ 15 3

Repositories

Showing 10 of 12 repositories
  • TWILIGHT Public

    High throughput tool for tall and wide multiple sequence alignment.

    TurakhiaLab/TWILIGHT's past year of commit activity
    C++ 31 MIT 1 0 0 Updated Sep 26, 2026
  • TurakhiaLab/SARS2_RecombinationAnalysis's past year of commit activity
    JavaScript 2 MIT 0 0 1 Updated Sep 22, 2026
  • HipSTR-MT Public Forked from gymrek-lab/HipSTR

    HipSTR-MT is a performance fork of gymrek-lab/HipSTR

    TurakhiaLab/HipSTR-MT's past year of commit activity
    C 1 GPL-2.0 2 0 0 Updated Sep 22, 2026
  • DIPPER Public

    Distance-based Phylogenetic Placer

    TurakhiaLab/DIPPER's past year of commit activity
    C++ 24 MIT 2 1 0 Updated Sep 8, 2026
  • metaWEPP Public

    Improving the resolution of metagenomic analysis using WEPP

    TurakhiaLab/metaWEPP's past year of commit activity
    Python 7 MIT 0 0 0 Updated Sep 7, 2026
  • WEPP Public

    Wastewater-Based Epidemiology using Phylogenetic Placements

    TurakhiaLab/WEPP's past year of commit activity
    C++ 19 MIT 3 2 1 Updated Sep 7, 2026
  • ROADIES Public

    Tool for fully-automated inference of species trees from raw genome assemblies

    TurakhiaLab/ROADIES's past year of commit activity
    Cuda 50 MIT 5 1 (1 issue needs help) 1 Updated Aug 25, 2026
  • panman Public

    Pangenome Mutation-Annotated Networks

    TurakhiaLab/panman's past year of commit activity
    C++ 45 MIT 8 2 2 Updated Jul 14, 2026
  • DP-HLS Public

    HLS-based framework to accelerate the implementation of 2-D DP kernels on FPGA

    TurakhiaLab/DP-HLS's past year of commit activity
    C++ 15 MIT 3 0 0 Updated Mar 26, 2026
  • rivet Public

    SARS-CoV-2 Recombination Viewer and Tracker

    TurakhiaLab/rivet's past year of commit activity
    JavaScript 7 MIT 1 3 0 Updated Nov 3, 2025

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