All pull requests

Pull requests

• Uv package management

  #451·a-r-j opened May 23, 2026Owner·5 tasks·

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  5

• Tmpfile

  #450·a-r-j opened May 23, 2026Owner·1 of 5 tasks·

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  1

• Add configurable timeout for PyMol mesh generation wait loop

  #449·a-r-j with CopilotAI opened May 22, 2026·6 of 7 tasks·

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• drop requirement on RCSB ligand expo after it has been retired

  #445·a-r-j opened Feb 25, 2026Owner·5 tasks·

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  13

• Fix incorrect node lookup in distance-based edge generation Fixes #418

  #423·elementare opened Apr 9, 2025·3 tasks done·

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• change import tqdm statement from from tqdm to from tqdm.autonotebook

  #422·kamurani opened Mar 21, 2025Contributor·

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• Correct the judgment of hydrogen bonds

  #370·ByteRoo opened Mar 2, 2024·

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  7

• Add the ability for the PDBManager to perform interface-based chain filtering

  #333·amorehead opened Aug 18, 2023Contributor·

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  10

• RFAM family <-> PDB structure ID mapping

  #324·rvinas opened Jun 27, 2023Collaborator·1 of 5 tasks·

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  5

• [WIP] Add FASTA Dataset class

  #289·a-r-j opened Mar 29, 2023Owner·6 tasks·

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  1

• Fix ml dataset

  #232·kamurani opened Nov 5, 2022Contributor·

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  1

• change the pdb_paths working style and support for loading both local…

  1 - Priority P1enhancement
  #214·1511878618 opened Sep 19, 2022Contributor·1 of 5 tasks·

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• add ProteinsX dataset classes

  #204·a-r-j opened Aug 2, 2022Owner·5 tasks·

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  3

• Graph plots

  #197·kamurani opened Jul 22, 2022Contributor·3 of 5 tasks·

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  17

• Protein_ligand graph support & junction tree feature

  #164·yuanqidu opened Apr 24, 2022Contributor·

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  43