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1. alphaflow alphaflow Public

   AlphaFold Meets Flow Matching for Generating Protein Ensembles

   Python 546 83

2. switchcraft switchcraft Public

   SwitchCraft: A Programmatic Framework for Designing State-Switching Proteins

   Python 93 13

3. mdgen mdgen Public

   Generative modeling of molecular dynamics trajectories

   Python 229 33

4. promera promera Public

   Biomolecular co-folding, binder filtering, and nanobody design

   Python 92 11