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  1. alphafold3_tools alphafold3_tools Public

    Toolkit for alphafold3 input and output files

    Python 108 12

  2. boltz_restr boltz_restr Public

    ⛓️ Boltz with restraint-guided inference

    Python 20 4

  3. boltz_ext boltz_ext Public

    Use https://github.com/cddlab/boltz_restr instead

    Python 18

  4. colabfold_boltz_restr colabfold_boltz_restr Public

    Jupyter Notebook 4

  5. colab_md colab_md Public

    MD simulation using google colab

    Jupyter Notebook 3

  6. yodosha_book_2024 yodosha_book_2024 Public

    Jupyter Notebook 2

Repositories

Showing 10 of 11 repositories
  • ColabFold_restr Public Forked from sokrypton/ColabFold

    Making Protein folding accessible to all!

    cddlab/ColabFold_restr's past year of commit activity
    Jupyter Notebook 0 MIT 759 0 0 Updated Sep 30, 2026
  • rgi_toolkit Public

    ⛓️ RGI-toolkit: Restraint-guided-inference toolkit, Differentiable Restraints for Controllable Biomolecular Structure Prediction

    cddlab/rgi_toolkit's past year of commit activity
    Python 0 0 0 0 Updated Sep 30, 2026
  • alphafold3_tools Public

    Toolkit for alphafold3 input and output files

    cddlab/alphafold3_tools's past year of commit activity
    Python 108 BSD-2-Clause 12 2 0 Updated Sep 29, 2026
  • boltz_restr Public

    ⛓️ Boltz with restraint-guided inference

    cddlab/boltz_restr's past year of commit activity
    Python 20 MIT 4 0 0 Updated Sep 28, 2026
  • colabfold_boltz_restr Public
    cddlab/colabfold_boltz_restr's past year of commit activity
    Jupyter Notebook 4 0 0 0 Updated Sep 5, 2026
  • bgccomplexbuilder Public

    module to build and predict protein multimer with AlphaFold

    cddlab/bgccomplexbuilder's past year of commit activity
    Python 1 Apache-2.0 0 0 0 Updated Jun 5, 2026
  • multi-objective-protein-design Public
    cddlab/multi-objective-protein-design's past year of commit activity
    Python 0 0 0 0 Updated Jan 28, 2026
  • boltz_ext Public

    Use https://github.com/cddlab/boltz_restr instead

    cddlab/boltz_ext's past year of commit activity
    Python 18 MIT 0 0 0 Updated Dec 5, 2025
  • colab_md Public

    MD simulation using google colab

    cddlab/colab_md's past year of commit activity
    Jupyter Notebook 3 0 0 0 Updated Jun 27, 2025
  • rdkit-introduction Public
    cddlab/rdkit-introduction's past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Mar 28, 2025
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