Computational Biology Laboratory

Computational Biology Laboratory at the University of Aveiro

Pinned Loading

cryfa cryfa Public

A secure encryption tool for genomic data

C++ 64 17
geco3 geco3 Public

An efficient DNA sequence compressor using Neural Networks

C 16 9
jarvis3 jarvis3 Public

Efficient compression of biological data

C 7
altair altair Public

AltaiR: a C toolkit for alignment-free and temporal analysis of multi-FASTA data

C 11 1
alcor alcor Public

Alignment-free simulation, computation, and visualization of Low-compexity regions in biological data

C 11 2
FALCON2 FALCON2 Public

A tool to infer metagenomic sample composition

C 5

Repositories

OptJV3 Public
A C thread-parallel genetic algorithm optimizer for discovering high-performing JARVIS3 compression parameter sets

cobilab/OptJV3's past year of commit activity

C 1 GPL-3.0 0 0 0 Updated Sep 28, 2026
alcor Public
Alignment-free simulation, computation, and visualization of Low-compexity regions in biological data

cobilab/alcor's past year of commit activity

C 11 GPL-3.0 2 0 0 Updated Sep 3, 2026
amito Public
Ancient Mitogenomes Letter

cobilab/amito's past year of commit activity

Shell 0 GPL-3.0 0 0 0 Updated Jul 29, 2026
cryfa Public
A secure encryption tool for genomic data

cobilab/cryfa's past year of commit activity

C++ 64 GPL-3.0 17 0 0 Updated May 3, 2026
FALCON2 Public
A tool to infer metagenomic sample composition

cobilab/FALCON2's past year of commit activity

C 5 GPL-3.0 0 0 0 Updated Apr 15, 2026
jarvis3 Public
Efficient compression of biological data

cobilab/jarvis3's past year of commit activity

C 7 GPL-3.0 0 0 0 Updated Mar 14, 2026
GeAnno Public
Automatic Annotation of Plant Gene Regions with Machine Learning

cobilab/GeAnno's past year of commit activity

Jupyter Notebook 2 MIT 1 0 0 Updated Mar 4, 2026
altair Public
AltaiR: a C toolkit for alignment-free and temporal analysis of multi-FASTA data

cobilab/altair's past year of commit activity

C 11 GPL-3.0 1 1 0 Updated Mar 4, 2026
OAWK Public

cobilab/OAWK's past year of commit activity

Shell 1 GPL-3.0 0 0 0 Updated Feb 19, 2026
GenomeClass Public
Classification and Analysis of genomes using Explainable Machine Learning

cobilab/GenomeClass's past year of commit activity

C 1 GPL-3.0 0 0 0 Updated Feb 18, 2026