Skip to content
View cperrone96's full-sized avatar

Block or report cperrone96

Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
cperrone96/README.md

Hi, I'm Christina 👋

Molecular biologist & published researcher → data scientist → business analytics.

I spent ~6 years at the bench — clinical diagnostic assay development (Pfizer), molecular diagnostics testing (BioReference), and molecular neuroscience research (UC Irvine) — where I lived in data: designing experiments, quantifying results, and publishing findings in four peer-reviewed Nature-family journals. I earned the IBM Data Science Professional Certificate to formalize the programming and modeling side of that work, and I now build end-to-end analyses in Python, SQL, and machine learning.

I like problems where scientific rigor meets real data: framing the question, getting the data (APIs, scraping, databases), cleaning it honestly, and letting the model — and the visualization — tell the story.

🔧 Tools

Python · pandas · NumPy · scikit-learn · statsmodels · lifelines · R · SAS · GraphPad Prism · SQL / SQLite · matplotlib · seaborn · Plotly / Dash · Folium · BeautifulSoup · Jupyter · BigQuery

🧫 Featured projects — scientific & biostatistics (bench science in code)

  • Dose-Response IC50 Analysis — 4-parameter-logistic (4PL) curve fitting to recover IC50 potencies across five compounds, with a concentration series spanning four orders of magnitude, Z'-factor assay QC, and asymmetric 95% CIs; the Prism/drc workflow from my Pfizer assay-development work, written in Python + R.
  • Differential Gene-Expression (RNA-seq) — case-vs-control transcriptomics pipeline: CPM normalization → PCA/QC → per-gene testing with Benjamini-Hochberg FDR across ~2,000 genes → volcano/heatmap → ground-truth validation (empirical FDR 2.7%, log2FC recovery r ≈ 0.97).
  • Experimental Design & Statistical Inference — the biostat workflow behind a controlled study: a-priori power/sample-size analysis, assumption checks, one-way ANOVA with η², Tukey HSD post-hoc, and Cohen's d with CIs — including a deliberately underpowered arm reported as absence of evidence, not evidence of absence.

📊 Featured projects — healthcare, pharma & commercial data science

  • Hospital Readmission Prediction — predicting 30-day readmission for diabetic patients (UCI 130-hospitals, 100k+ encounters); scikit-learn pipelines, imbalanced-class evaluation, and threshold tuning for a realistic operating point.
  • Clinical-Trial Survival Analysis — time-to-event read-out of the GBSG2 breast-cancer trial (Kaplan-Meier, log-rank, Cox PH), implemented in Python, R, and SAS to mirror publication and clinical-reporting workflows.
  • Medical-Sales Churn & Revenue Forecasting — B2B account churn prediction plus Holt-Winters revenue forecasting on reproducible synthetic data, turned into a top-decile retention play.

🛠️ More projects

🧬 Background

BS in Neurobiology (Cum Laude, UC Irvine) · 4 peer-reviewed publications · IBM Data Science Professional Certificate · currently Director of Operations & Business Development, applying data + analytics to drive commercial results.

📫 Reach me: christina.rperrone@gmail.com

Pinned Loading

  1. clinical-trial-survival-analysis clinical-trial-survival-analysis Public

    Survival analysis of the GBSG2 breast-cancer trial (Kaplan-Meier, log-rank, Cox PH) implemented in Python, R, and SAS.

    Jupyter Notebook

  2. differential-gene-expression differential-gene-expression Public

    RNA-seq case-control differential expression: PCA, per-gene testing with FDR correction, volcano plot, validated on synthetic data.

    Jupyter Notebook

  3. dose-response-ic50-analysis dose-response-ic50-analysis Public

    Dose-response analysis and IC50 determination (4PL curve fitting, Z'-factor assay QC) in Python and R.

    Jupyter Notebook

  4. experimental-design-inference experimental-design-inference Public

    Applied biostatistics: a-priori power analysis, ANOVA, Tukey HSD post-hoc, and effect sizes on a multi-arm study.

    Jupyter Notebook

  5. hospital-readmission-prediction hospital-readmission-prediction Public

    Predicting 30-day hospital readmission for diabetic patients (UCI 130-hospitals, 100k+ encounters) with scikit-learn.

    Jupyter Notebook

  6. medical-sales-churn-forecasting medical-sales-churn-forecasting Public

    B2B medical-device account churn prediction and Holt-Winters revenue forecasting on reproducible synthetic data.

    Jupyter Notebook