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  1. YosefLab/Hotspot YosefLab/Hotspot Public

    Python 165 19

  2. YosefLab/VISION YosefLab/VISION Public

    Signature Analysis and Visualization for Single-Cell RNA-seq

    R 186 33

  3. YosefLab/Compass YosefLab/Compass Public

    In-Silico Modeling of Metabolic Heterogeneity using Single-Cell Transcriptomes

    Python 126 33

  4. scTransformPy scTransformPy Public

    A Python implementation of of the scTransform method

    Python 9 2

  5. Snakemake_Tutorial Snakemake_Tutorial Public

    A short tutorial on getting started with Snakemake for workflow management

    Python 59 14

  6. YosefLab/FastProject YosefLab/FastProject Public

    Dimensionality reduction for single cell RNA-seq data

    Python 36 10