All pull requests

Pull requests

• Add Pytest 8 compat

  #1923·mr-c opened Feb 17, 2024Contributor·5 tasks done·

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• Fix build against Python 3.12

  #1922·ogayot opened Nov 23, 2023·3 of 5 tasks·

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• re-run cython to support Python 3.10 + misc patches from the Debian package

  #1917·mr-c opened Aug 22, 2022Contributor·3 of 5 tasks·

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  1

• Add badges for the Debian packages

  #1910·mr-c opened Feb 22, 2021Contributor·1 of 5 tasks·

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• Create countgraph correctly

  #1908·ryfi opened Oct 26, 2020·

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• [WIP] Cleaning up build

  #1888·standage opened Feb 21, 2019Member·

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• [WIP] Experiment compacting counttables into a nodetable given a max abundance criterion

  C++CythonWork In Progress
  #1874·standage opened Jun 18, 2018Member·1 of 3 tasks·

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  2

• Mqf integration2

  #1873·shokrof opened Jun 18, 2018Collaborator·5 tasks done·

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  7

• switch to using c++ compiler instead of g++ to fix cpp-demos on mac os x

  #1865·ctb opened May 19, 2018Member·

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  5

• [MRG] Add "good PR" examples

  DocumentationReady For Review and Merge!
  #1848·standage opened Mar 14, 2018Member·1 task done·

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  1

• NOT FOR MERGING -- Testing CQF versus bloom filter and count-min sketch

  #1836·drtamermansour opened Feb 4, 2018Member·8 tasks·

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  1

• boink extensions: or, streaming cDBG stuff

  #1821·camillescott opened Dec 11, 2017Member·8 tasks·

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• [WIP] Prototype: count k-mers in banded mode in a single pass

  Work In Progress
  #1818·standage opened Nov 16, 2017Member·8 tasks·

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  3

• Fix usage of merge-partitions

  #1802·souravsingh opened Oct 21, 2017Contributor·6 of 8 tasks·

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  1

• Cython tidying

  Cython
  #1774·camillescott opened Sep 7, 2017Member·8 tasks·

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  4

• [MRG] test, and actually fix, find-nullomers script; add documentation and test input file

  #1768·ctb opened Sep 1, 2017Member·8 tasks done·

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  3

• [WIP] Enable banding for computing k-mer abundance distributions

  Work In Progress
  #1767·standage opened Aug 31, 2017Member·8 tasks·

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  3

• [WIP] Add FNV1a hash function

  #1760·betatim opened Aug 22, 2017Member·10 tasks·

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  5

• Promote error correction scripts from sandbox

  #1743·wltrimbl opened Jul 10, 2017Collaborator·6 of 19 tasks·

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  8

• [WIP] Enable automatic detecting and loading all filter/sketch types

  Work In Progress
  #1717·standage opened Jun 1, 2017Member·8 tasks·

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  2

• [WIP] Add infrastructure for fixed random seeds in tests

  #1655·betatim opened Mar 1, 2017Member·8 tasks·

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  5

• [WIP] Add a -H/--hash-function option.

  #1623·ctb opened Feb 16, 2017Member·8 tasks·

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  1

• Fix compiler and linker warnings

  #1605·betatim opened Feb 1, 2017Member·2 tasks done·

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  14

• Atomic nibble instead of mutex

  #1601·betatim opened Jan 30, 2017Member·8 tasks done·

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  7

• rename consume to consume_string

  #1589·ctb opened Jan 24, 2017Member·8 tasks·

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