Hi!
Alphafold's multimer model produces iptm scores that are saved within the pickle file as below:
distogram
experimentally_resolved
masked_msa
predicted_aligned_error
predicted_lddt
structure_module
plddt
aligned_confidence_probs
max_predicted_aligned_error
ptm
iptm
ranking_confidence
However, it seems like fastfold's output does not contain this data
msa
pair
single
sm
final_atom_positions
final_atom_mask
final_affine_tensor
lddt_logits
plddt
distogram_logits
masked_msa_logits
experimentally_resolved_logits
tm_logits
predicted_tm_score
aligned_confidence_probs
predicted_aligned_error
max_predicted_aligned_error
Is it possible to get the iptm scores?
Thanks!
Hi!
Alphafold's multimer model produces iptm scores that are saved within the pickle file as below:
However, it seems like fastfold's output does not contain this data
Is it possible to get the iptm scores?
Thanks!