Popular repositories Loading

1. kindred kindred Public

   A Python biomedical relation extraction package that uses a supervised approach (i.e. needs training data).

   Python 157 29

2. pubrunner pubrunner Public

   A framework for keeping biomedical text mining result up-to-date

   Python 43 6

3. cancermine cancermine Public

   Text-mined knowledgebase for drivers, oncogenes and tumor suppressors in cancer

   R 42 7

4. pgxmine pgxmine Public

   Text mining for pharmacogenomic associations for PharmGKB

   TeX 28 6

5. civicmine civicmine Public

   Text mining cancer biomarkers for the CIVIC database

   Python 23 1

6. biowordlists biowordlists Public

   Biomedical wordlists (of drugs, genes, etc) for several text mining projects

   Python 19 4