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1. SPOT-RNA SPOT-RNA Public

   RNA Secondary Structure Prediction using an Ensemble of Two-dimensional Deep Neural Networks and Transfer Learning.

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2. SPOT-RNA2 SPOT-RNA2 Public

   Improved RNA Secondary Secondary Structure Prediction using Evolutionary Profile, Mutational Coupling and Two-dimensional Transfer Learning

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3. RNAsnap2 RNAsnap2 Public

   Single-sequence and Profile-based Prediction of RNA Solvent Accessibility Using Dilated Convolution Neural Network

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4. RNAcmap RNAcmap Public

   A Fully Automatic Method for Predicting Contact Maps of RNAs by Evolutionary Coupling Analysis

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5. SPOT-RNA-2D SPOT-RNA-2D Public

   SPOT-RNA-2D: Predicting RNA distance-based contact maps by integrated deep learning on physics-inferred base-pairing and evolutionary-derived coupling

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6. SPOT-RNA-1D SPOT-RNA-1D Public

   RNA Backbone Torsion and Pseudotorsion Angle Prediction using Dilated Convolutional Neural Networks

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