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marvinquiet/README.md

👋 Welcome!

my GitHub stats Top Langs

🔥 Streak stats

GitHub Streak

  • 🔭 I’m currently working on spatial transcriptomics.
  • 💬 Ask me about cell typing in single-cell genomics and functional domain detection in spatial transcriptomics.
  • 📫 How to reach me: let it be.
  • ⚡ Fun facts: a lifelong Ph.D. candidate in Marathon, reading, fishing, etc.

Pinned Loading

  1. scPanKD scPanKD Public

    Code repo for scPanKD

    Python 3 1

  2. Cellcano Cellcano Public

    Supervised cell type identification for scATAC-seq data

    Python 15 2

  3. RefConstruction_supervisedCelltyping RefConstruction_supervisedCelltyping Public

    Source code for "Evaluation of some aspects in supervised cell type identification for single-cell RNA-seq: classifier, feature selection, and reference construction".

    Python 5 5

  4. LRcell LRcell Public

    The goal of LRcell is to identify specific sub-cell types that drives the changes observed in a bulk RNA-seq differential gene expression experiment. To achieve this, LRcell utilizes sets of cell m…

    R 4 1

  5. marvinquiet.github.io marvinquiet.github.io Public

    Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

    JavaScript

  6. SpaDOT SpaDOT Public

    Optimal transport modeling uncovers spatial domain dynamics in spatiotemporal transcriptomics

    Python 3 2