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  1. make_SILVA_db make_SILVA_db Public

    General procedure for making QIIME 2 compatible SILVA reference files

    Python 20 15

  2. Misc_Code Misc_Code Public

    Simple and crude scripts that I've written for my own work that may be of help to others with similar tasks

    Python 13 11

  3. nf-refdb-amplicon nf-refdb-amplicon Public

    Nextflow pipeline for generating reference databases for amplicon sequences.

    Nextflow 4 1

  4. RESCRIPt RESCRIPt Public

    Forked from bokulich-lab/RESCRIPt

    REference Sequence annotation and CuRatIon Pipeline

    Python 1

  5. q2-iqtree2 q2-iqtree2 Public

    A full-featured IQ-TREE 2 plugin for QIIME 2.

    Python 1

  6. pycogent pycogent Public

    Forked from pycogent/pycogent

    My fork of 'PyCogent' : Official repository for software and unit tests

    Python