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nahid18/README.md

hi there 👋

  • âš¡ PhD student at USC
  • 📖 biochem and mol bio background
  • 💻 programming, soccer, cats
  • 📫 contact: dm me on x (@abdnahid_)

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  1. mancusolab/traceax mancusolab/traceax Public

    Stochastic trace estimation using JAX

    Python 22 3

  2. mancusolab/perturbvi mancusolab/perturbvi Public

    Perturbvi is a scalable approach to infer regulatory modules in large-scale single-cell pertubation screen data.

    Python 3

  3. easylift easylift Public

    Perform genomic liftover

    R 8

  4. collaborativebioinformatics/isocomp collaborativebioinformatics/isocomp Public

    Isocomp provides tools to compare any number of transcriptome assemblies (GTF + fasta) from long read RNAseq

    HTML 3 9

  5. virustaxo-wf virustaxo-wf Public

    VirusTaxo workflow on LatchBio

    Python 1

  6. ncov-bd ncov-bd Public

    interactive maximum-likelihood phylogenies for SARS-CoV-2 genomes and variants of concern from Bangladesh