Secrier Lab @ UCL Genetics Institute

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1. SpottedPy SpottedPy Public

   Hotspot cluster distance analysis in spatial transcriptomic data

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2. HistoMIL HistoMIL Public

   A Python package for handling histopathology whole-slide images using multiple instance learning (MIL) techniques.

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3. EnrichMap EnrichMap Public

   EnrichMap: Spatially-informed enrichment analysis for functional interpretation of spatial transcriptomics.

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4. EMT EMT Public

   This repository contains code for the evaluation of epithelial-to-mesenchymal transition states in cancer.

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5. EMP-FM EMP-FM Public

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6. tumourMassDormancy tumourMassDormancy Public

   This repository contains the code developed for the analysis of tumour mass dormancy, immunological and angiogenic dormancy across cancers from the Cancer Genome Atlas (TCGA).

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