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  2. ensembl-vep ensembl-vep Public

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  3. beam beam Public

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  5. pysam pysam Public

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    Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.

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  6. PyVCF PyVCF Public

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    A Variant Call Format reader for Python.

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