archaeopteryx

Here are 5 public repositories matching this topic...

cmzmasek / archaeopteryx-js

Archaeopteryx.js is a software tool for the visualization and analysis of highly annotated phylogenetic trees.

visualization javascript evolution phylogenetic-trees beast phylogenetics virology mrbayes archaeopteryx paleontology phylodynamics multiple-sequence-alignment phyloxml archaeopteryx-js nextstrain auspice treetime nexus-format

Updated Oct 2, 2026
JavaScript

cmzmasek / forester

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forester is a collection of open-source libraries and tools for genomics and evolutionary biology research. It includes the tree viewer Archaeopteryx.

visualization genomics taxonomy evolution computational-biology phylogenetic-trees beast phylogenetics virology archaeopteryx paleontology time-trees tanglegram phyloxml nextstrain auspice treetime mad-rooting

Updated Oct 1, 2026
Java

zachcp / archaeopteryx-js

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Html-Widget wrapper for archaeopteryx.js

r phylogenetics htmlwidgets archaeopteryx

Updated Sep 19, 2017
JavaScript

cmzmasek / phylobuild

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Build a well-annotated protein phylogeny (Pfam domain architectures, taxonomy, support) from a FASTA file in one command; phyloXML for Archaeopteryx.

pipeline evolution computational-biology phylogenetics evo-devo iq-tree hmmer virology archaeopteryx mafft cd-hit archaeopteryx-js fasttree raxml-ng trimal

Updated Sep 25, 2026
Python

cmzmasek / archaeopteryx

Star

Archaeopteryx — a desktop viewer for publication-quality phylogenetic tree figures

visualization genomics genetics taxonomy evolution computational-biology phylogenetic-trees beast phylogenetics virology archaeopteryx paleontology phylodynamics time-trees tanglegram phyloxml nextstrain auspice mad-rooting

Updated Oct 1, 2026

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