bgzf

Efficient pythonic random access to fasta subsequences

extract random-positioned data from gzip files with no penalty, including gzip tailing like with 'tail -f' !

Python CLI for alignment-free genomics.

bgzf/ciso/daxcr/dictzip/gzinga/migz/razf frontends using zlib/zlib-ng/7-zip/zopfli/libdeflate/miniz/libslz/igzip/cryptopp/kzip backends with parallel (de)compression. compilable with gcc/clang/icc/open64.

Efficient gzip to BGZF transcoder using half-decompression (2-4x faster than decompress+recompress)

A BGZF random access reader library

Continuous tail command (like `tail -f`) for bgzip files

bgzf4j is a compression library for BGZF (Blocked GNU Zip Format)

Streaming BGZF compression with on-the-fly tabix and CSI indexing

OMGzip: Optimized Multithreaded Gzip decompressor. Up to 2x faster than rapidgzip.

Python implementation of htslib supporting BAM, SAM, and BGZF compression

BGZF reader in Go.

Streaming DEFLATE-family compression library and CLI in Zig 0.16. std.Io readers and writers, fixed caller-owned memory, no dependencies.