imaging

hyperSpec: Tools for Spectroscopy (R package)

A tool to perform comprehensive analysis of high-dimensional radiomic datasets

An interactive multi-channel image viewer for R

coldcuts is an R package to automatically generate and plot segmentation drawings in R

Revealing Biological Insights for Imaging-Derived Phenotypes through Transcriptomic Enrichment

Gene set enrichment analysis of the transcriptomic associations of the T1-w/T2-w MRI.

TDI Capstone Project

Visualitzation and processing toolbox for Confocal Raman Spectroscopy Imaging

Workflow to study the distribution of tertiary lymphatic structures in the meninges of rodents

The goal of segment_me_label_free is to quantitate cell numbers from high-content microscope images using only the image. We implement this for Bright-field label-free images and it does not require a training dataset.

An fluorescence imaging process pipeline for tau aggregates