legionella

UPHL's Reference Free Pipeline

Identifying cooling towers from satellite and aerial imagery

Get L. pneumophila ST from long-read or hybrid assemblies.

LpSubP is a rapid subtyping tool for Legionella pneumophila with core gene set

This repository contains bioinformatics scripts and a Docker container to perform in silico Legionella species identification from Illumina MiSeq Paired End Reads or De Novo assembled contig sequences. This tool is intended to provide the species identity of an unknown Legionella isolate. This tool should only be used on sequence data produced f…

Repository for NIST‑EPA Legionella study Python tools. Includes scripts for aerosol particle size distribution analysis, emission‑rate calculations, data cleaning, visualization, and statistical modeling of shower‑generated aerosols under varying temperature, humidity, and exhaust‑fan conditions.

Multi-species reactive transport model of opportunistic pathogen (Legionella/Pseudomonas) growth, biofilm attachment, and chlorine inactivation in drinking water networks, with global sensitivity analysis identifying disinfection efficacy as the dominant control on pathogen persistence.

Open-source statutory compliance platform for water hygiene, fire safety, asbestos and electrical