Terminal protein structure viewer — interactive 3D visualization of PDB/mmCIF structures with cartoon ribbons, braille rendering, and Sixel/Kitty graphics
Software for macromolecular model-building
macOS desktop app and Quick Look extension for molecular previews: Mol* 3D, xyzrender SVG, and RDKit grids.
blend molecules!
Visualize structure data from Biotite with PyMOL
A simple X11 molecular viewer
Ball-and-stick crystal structure viewer for Python. Publication-quality vector output (SVG, PDF) and trajectory animations (GIF, MP4) via matplotlib, with ASE and pymatgen interoperability.
A lightweight script to make vector images of molecules
Use this python plugin to visualize moleculars in Cinema 4D, and creat interesting animation with MoGraph tools!
Tool to compute molecular Solvent Excluded Surface meshes on the GPU using CUDA
Curated PyMOL configs and scripts for publication-quality rendering.
A molecular graphic toy visualizer in Rust
Tinker-FFE: Molecular Engineering GUI for Tinker
Cartoon mesh generation for secondary structure of proteins in C++
Structural biology superpowers for AI coding agents: PyMOL, ChimeraX, AlphaFold DB, RCSB PDB, UniProt, and Rosetta workflows.
Free, open-source 3D molecule viewer in the browser. Open PDB entries, AlphaFold models, PubChem compounds or your own PDB, mmCIF, SDF, MOL and XYZ files. Cartoon, stick and surface views, measurements, a linked sequence viewer, share links and iframe embeds. Built with React Three Fiber.
A 3D viewer and analysis workbench for protein and nucleic-acid structures, predicted complexes, density maps and structural proteomics data. One self-contained program for your own computer, installed with one command; your files stay on your machine.
Free, GPU-accelerated 3D molecular structure viewer + LAMMPS workbench — script builder with 140 commands, CMake build helper, dump-trajectory playback. Runs entirely in your browser.
A browser-based 3D cartoon renderer for CIF and POSCAR crystal structures using Three.js.
Local-first, US-align-powered tool for auditable multi-chain structure comparison, interactive 3D visualization, and publication-ready exports.
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