Rapid Generation of Rare Event Pathways Using Direction Guided Adaptive Sampling: From Ligand Unbinding to Protein (Un)Folding
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Sep 16, 2026 - Jupyter Notebook
#
rare-events
Here are 38 public repositories matching this topic...
Bayesian histograms for estimation of binary rare event rates, with fully automated bin pruning 📊
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Oct 14, 2021 - Jupyter Notebook
🦜 DISCOTRESS 🦜 is a software package to simulate and analyse the dynamics on arbitrary Markov chains
markov-model simulation markov-chain kinetic-monte-carlo markov-chains stochastic-processes stochastic-simulation-algorithm markov-process random-walk ctmc enhanced-sampling stochastic-simulation dtmc network-dynamics rare-events k-shortest-paths markovian-dynamics continuous-time-markov-chain simulation-algorithms
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Jul 29, 2021 - C++
Where do people look on images in average? At rare, thus surprising things! Let's compute them automatically
saliency-map saliency salient surprise rarity rare-events visual-attention rare-category-detection saliency-model saliency-prediction saliency-attentive-model saliency-analysis numediart-attention
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Jun 14, 2020
Learn to get started using DISCOTRESS with these tutorials! Then apply to your own Markov chains in ecology 🦜🌴 economics 💸📈 biophysics 🧬🦠 and more!
markov-model simulation markov-chain tutorials kinetic-monte-carlo markov-decision-processes stochastic-simulation-algorithm markov-process random-walk ctmc discrete-event-simulation stochastic-simulation dtmc network-dynamics rare-events markovian-dynamics markov-decision-process stochastic-dynamics
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Sep 12, 2021 - Brainfuck
Predicting Critical Transitions in Multiscale Dynamical Systems Using Reservoir Computing
reservoir-computing predictive-modeling rare-events critical-transitions data-driven-method multiscale-systems
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Dec 1, 2020 - Python
Software and data related to the paper "Variational autoencoder with weighted samples for high-dimensional non-parametric adaptive importance sampling"
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Jan 29, 2024 - Python
Cloning algorithm for measuring rare events from stochastic time series
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Jan 24, 2024 - Python
Visual Attention : what is salient in an image with DeepRare2019
saliency-map saliency rarity rare-events visual-attention saliency-model saliency-prediction saliency-attentive-model saliency-analysis deeprare2019
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Jun 9, 2020 - Python
Force-kernel eABF: a PLUMED enhanced-sampling plugin that delivers smooth mean-force estimates and free-energy landscapes from the earliest stages of sampling.
molecular-dynamics computational-chemistry kernel-methods biophysics enhanced-sampling plumed metadynamics aimd rare-events abf collective-variables free-energy-calculations nadaraya-watson-regression opes eabf
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Jul 15, 2026 - C++
A simple Python implementation for Rare Event Logit model of King and Zeng (2001)
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Oct 4, 2023 - Python
This repository introduces E-IRFS, a general-purpose sampling method that boosts rare-class performance in long-tailed object detection datasets.
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Mar 26, 2026 - Python
Bouncy Particle Sampler in rare event simulation
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Sep 13, 2019 - Jupyter Notebook
Rare events simulation on a football championship in Python
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Nov 22, 2017 - Python
Priority-guided seed-path/counterexample generation (proof of concept)
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Mar 27, 2026 - Python
A Python library for rare dynamical event sampling in non-equilibrium systems using Transition Path Sampling (RTP-TPS) and Variational Path Sampling (VPS).
python dynamical-systems non-equilibrium rare-events transition-path-sampling variational-path-sampling
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Jan 31, 2026 - Python
Extreme value analysis for insurance losses: POT/GPD, GEV with uncertainty, threshold diagnostics, return levels, body-tail splicing.
python insurance gpd actuarial claims evt rare-events actuarial-science risk-modeling tail-risk peaks-over-threshold extreme-value-theory large-claims
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Jul 14, 2026 - Python
Trustworthy AI for satellite conjunction triage using calibrated ML, Bayesian logistic regression, and uncertainty-aware escalation on public CDM data.
machine-learning calibration uncertainty-quantification bayesian-machine-learning rare-events trustworthy-ai space-domain-awareness space-safety satellite-collision-avoidance
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Jul 6, 2026 - Python
5 个基于 NHIS 公开人群数据的 Agent Skills 癌症风险预测技能包，聚焦罕见结局建模与评估，含 11 个数据集的可用性调研 | Rare-outcome cancer risk prediction Agent Skills packages on public population-survey data
python machine-learning cancer reproducible-research public-health xgboost epidemiology rare-events risk-prediction nhis
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Sep 18, 2026 - Python
CART-based synthesis (synthpop) on MIMIC-IV (n=70,954 ICU stays), the same question against a different generator: count, not sample size, decides what's estimable. The generator attenuates the interaction regardless.
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Sep 4, 2026 - R
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