Sentieon / sentieon-dnaseq Star 23 Code Issues Pull requests Sentieon DNAseq acceleration gatk bioinformatics-pipeline variant-calling dnaseq bwa-mem dna-sequencing sentieon gatk4 genomics-data Updated Dec 30, 2020 Shell
Sentieon / sentieon-dnascope-ml Star 12 Code Issues Pull requests Sentieon DNAscope + Machine Learning Model machine-learning next-generation-sequencing dna bioinformatics-pipeline variant-calling germline-variants sentieon genomics-data dnascope Updated Mar 19, 2025 Shell
Sentieon / sentieon-docker Star 9 Code Issues Pull requests Example Dockerfiles for use with the Sentieon software dockerfiles sentieon sentieon-docker Updated Sep 1, 2026 Dockerfile
Sentieon / Sentieon-WDL Star 9 Code Issues Pull requests WDL pipelines for the Sentieon tools wdl-workflow sentieon ccdg functional-equivalent-pipeline fastq2vcf Updated Dec 29, 2022 WDL
Sentieon / sentieon-google-genomics Star 7 Code Issues Pull requests Run Sentieon pipelines on Google Cloud Platform somatic-variants gcp bioinformatics-pipeline cloud-computing speedup genomic-data-analysis ngs-pipeline germline-variants sentieon Updated Aug 4, 2025 Shell
isayrhythm / bioinformatics-scripts Star 5 Code Issues Pull requests python workflow snakemake scrna-seq wgs sentieon Updated Jun 5, 2026 Jupyter Notebook
Sentieon / Sentieon-cwl Star 4 Code Issues Pull requests CWL pipelines for the Sentieon tools distributed-computing ngs-pipeline sentieon cwl-standards toil-supports Updated Oct 22, 2018 Common Workflow Language
haoziyeung / somatic_pipeline Star 4 Code Issues Pull requests 肿瘤体细胞突变检测流程（组织、cfDNA均可，需要有对照） somatic-mutations cnv fusion-genes sentieon Updated Dec 29, 2017 Perl