vcf

a calendar server aiming to be simple, fast and passwordless

CLI to manage contacts

VEP-like tool for sequence ontology and HGVS annotation of VCF files

A fast, memory-efficient variant effect predictor written in Rust: a from-scratch reimplementation of the Ensembl Variant Effect Predictor (VEP) that takes the same inputs and flags, emits VEP's consequence vocabulary in VEP's output formats, and annotates population-scale callsets two orders of magnitude faster than the Perl implementation.

A port of biocommons/hgvs to the Rust programming language

Rust implementation of Flavia95's GFAtoVCF

Turns same-codon SNVs into MNVs and computes the true amino acid change

VCF/BCF [un]compressed [un]indexed

Genome annotation based on Rust and RocksDB

Calculates pairwise distances between samples using alelle frequencies

Fast VCF toolkit — normalize, liftover, filter — as a single static binary. 4× faster than bcftools on hot paths. No htslib, no Python, no C dependencies.

A port of biocommons/seqrepo to the Rust programming language

Pure-Rust BAM/VCF/BCF depth, pileup, variants & stats with Python bindings — native Linux/macOS/Windows wheels, pysam-parity, no htslib.

Simple tool to retrieve email addresses in a mutt compatible format from vcf files

Set of I/O-free coroutines to manage contacts

an API for intersections of genomic data

Edit and merge vCards as ergonomic TOML

Fast, memory-efficient toolkit for querying Hail tables and VCFs, exporting genomic data, and running distributed GCP jobs.

kira-bt is a high-performance toolkit for VCF/BCF processing with bcftools-oriented command-line compatibility.

Rust-based background worker for varfish-server