Skip to content
View torognes's full-sized avatar
165 followers · 35 following

Achievements

Achievement: Pull SharkAchievement: Starstruckx3Achievement: QuickdrawAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull SharkAchievement: Starstruckx3Achievement: QuickdrawAchievement: Arctic Code Vault Contributor

Highlights

  • Pro

Organizations

@uio-bmi @ous-mik

Block or report torognes

Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse
torognes/README.md

Hi

  • I’m working on improving the tools VSEARCH and Swarm for microbiome bioinformatics.
  • I’m often thinking about new ideas for how we can use clever algorithms and data structures to improve bioinformatics tools.
  • I'm teaching the course IN4030 Introduction to bioinformatics at the University of Oslo every spring semester.
  • I'm also involved in various projects at Oslo University Hospital (OUS), including Publika, a publication database for OUS.

Pinned Loading

  1. vsearch vsearch Public

    Versatile open-source tool for microbiome analysis

    C++ 761 138

  2. swarm swarm Public

    A robust and fast clustering method for amplicon-based studies

    C++ 150 24

  3. swipe swipe Public

    Smith-Waterman database searches with inter-sequence SIMD parallelisation

    C++ 61 22

  4. uio-bmi/compairr uio-bmi/compairr Public

    Comparison of Adaptive Immune Receptor Repertoires

    C++ 30 7