AI Research: Large Language Models, Graph Neural Networks
Biology Research: Directed Evolution, Function Prediction, Binder Design
Email: tanyang.august@gmail.com ; Website: https://tyang816.github.io/
Open-source Platform: https://venusfactory.bio/ & Official Platform: https://matvenus.com/
- Tan Y, Gou W, Zhong B, et al. VenusX: Unlocking Fine-Grained Functional Understanding of Proteins. ICLR, 2026.
- Tan Y, Liu C, Gao J, et al. VenusFactory: An Integrated System for Protein Engineering with Data Retrieval and Language Model Fine-Tuning. ACL Demo, 2025.
- Tan Y, Wang R, Wu B, et al. From high-throughput evaluation to wet-lab studies: advancing mutation effect prediction with a retrieval-enhanced model. ISMB/ECCB, 2025.
- Li M*, Tan Y*, Ma X, et al. ProSST: Protein Language Modeling with Quantized Structure and Disentangled Attention. NeurIPS, 2024.
- Tan Y, Zhou B, Zheng L, et al. Semantical and Topological Protein Encoding Toward Enhanced Bioactivity and Thermostability. eLife, 2024.
- Tan Y, Zhang Z, Li M, et al. MedChatZH: A tuning LLM for traditional Chinese medicine consultations. Computers in Biology and Medicine, 2024.
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