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1. NeuroMed-Sim-Library NeuroMed-Sim-Library Public

   A library of different types of neurological medications such as SSRIs, SNRIs, Stimulants, Benzodiazepines, NMDAs and etc all being simulated to produce data on total plasma concentrations, therape…

   Python 3

2. bacteriocin-length-mic-analysis bacteriocin-length-mic-analysis Public

   Reproducible bacteriocin protein length and minimum inhibitory concentration analysis

   Python 2

3. openomicsbench openomicsbench Public

   Traceable omics benchmarks with multi-method matrices, regression gates, portable bundles and sequence tools.

   Python 2

4. ssri-neurogenesis-multiscale ssri-neurogenesis-multiscale Public

   Stochastic neurogenesis model and six-dataset transcriptomic analysis testing why cell number alone may not capture functional change during SSRI treatment.

   Python 2

5. INR_Gate INR_Gate Public

   Python framework for simulating when a plasma ctDNA negative result is analytically informative before anti-EGFR rechallenge in metastatic colorectal cancer. Uses synthetic data only; not clinicall…

   Python 2

6. where-glioblastoma-cell-states-gather where-glioblastoma-cell-states-gather Public

   Reproducible spatial modelling of glioblastoma cell states across patients.

   R 2