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1. grunwaldlab/metacoder grunwaldlab/metacoder Public

   Parsing, Manipulation, and Visualization of Metabarcoding/Taxonomic data

   R 144 29

2. ropensci/taxa ropensci/taxa Public

   taxonomic classes for R

   R 51 12

3. nf-core/pathogensurveillance nf-core/pathogensurveillance Public

   Surveillance of pathogens using population genomics and sequencing

   Nextflow 53 6

4. grunwaldlab/krisp grunwaldlab/krisp Public

   A lightweight kmer-based algorithm for designing diagnostic CRISPR assays using genome data.

   Python 13 3