java -jar RNA-Bloom.jar -version
java -version
Currently, hairpins are still kept if there are read support. The default behavior needs to be more aggressive.
Please report
java -jar RNA-Bloom.jar -version2.0.1
java -version20
rnabloom -long reads.fastq.gz
Currently, hairpins are still kept if there are read support. The default behavior needs to be more aggressive.