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Detecting fusion transcripts in long read or paired-end short read #93

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@cprovido

In my reading of Fusion-Bloom, it states that paired-RNA seq reads are assembled by RNA-Bloom to reconstruct chimeric transcripts. However, I'm not sure if Fusion-Bloom is still up-to-date.

Is it still possible to generate fusion transcripts from RNA-Bloom or should directly use Fusion-Bloom?

With my second dataset of only long read fastqs from MinION, is chimeric detection supported by RNA-Bloom?

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