In
|
elif(name == "hmmsearch_output.sto"): |
the file name
hmmsearch_output.sto, that exists nowhere else in the repository, is invoked. Normally, template hit MSAs are called
hmm_output.sto. It seems this part of the code is only relevant at training time, so perhaps the training database is constructed using
hmmsearch_output.sto as a name instead of
hmm_output.sto?
In
openfold/openfold/data/data_pipeline.py
Line 786 in e938c18
the file name
hmmsearch_output.sto, that exists nowhere else in the repository, is invoked. Normally, template hit MSAs are calledhmm_output.sto. It seems this part of the code is only relevant at training time, so perhaps the training database is constructed usinghmmsearch_output.stoas a name instead ofhmm_output.sto?